Browsing Artikel in Fachzeitschriften by Author "Sachse, Konrad"
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2023-09-16ZeitschriftenartikelDe novo genome assembly resolving repetitive structures enables genomic analysis of 35 European Mycoplasmopsis bovis strains Triebel, Sandra; Sachse, Konrad; Weber, Michael; Heller, Martin; Diezel, Celia; Hölzer, Martin; Schnee, Christiane; Marz, ManjaMycoplasmopsis (M.) bovis, the agent of mastitis, pneumonia, and arthritis in cattle, harbors a small genome of approximately 1 Mbp. Combining data from Illumina and Nanopore technologies, we sequenced and assembled the ...
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2023-05-29ZeitschriftenartikelGenomic analysis of 61 Chlamydia psittaci strains reveals extensive divergence associated with host preference Sachse, Konrad; Hölzer, Martin; Vorimore, Fabien; Barf, Lisa-Marie; Sachse, Carsten; Laroucau, Karine; Marz, Manja; Lamkiewicz, KevinBackground: Chlamydia (C.) psittaci, the causative agent of avian chlamydiosis and human psittacosis, is a genetically heterogeneous species. Its broad host range includes parrots and many other birds, but occasionally ...
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2024-07-01ZeitschriftenartikelRIBAP: a comprehensive bacterial core genome annotation pipeline for pangenome calculation beyond the species level Lamkiewicz, Kevin; Barf, Lisa-Marie; Sachse, Konrad; Hölzer, MartinMicrobial pangenome analysis identifies present or absent genes in prokaryotic genomes. However, current tools are limited when analyzing species with higher sequence diversity or higher taxonomic orders such as genera or ...