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2021-09-17Zeitschriftenartikel
Tracking the international spread of SARS-CoV-2 lineages B.1.1.7 and B.1.351/501Y-V2 with grinch (updated)
dc.contributor.authorO'Toole, Áine
dc.contributor.authorHill, Verity
dc.contributor.authorPybus, Oliver G.
dc.contributor.authorWatts, Alexander
dc.contributor.authorBogoch, Issac I.
dc.contributor.authorKhan, Kamran
dc.contributor.authorMessina, Jane P.
dc.contributor.authorThe COVID-19 Genomics UK consortium
dc.contributor.authorNetwork for Genomic Surveillance in South Africa (NGS-SA)
dc.contributor.authorBrazil-UK CADDE Genomic Network
dc.contributor.authorTegally, Houriiyah
dc.contributor.authorLessells, Richard R.
dc.contributor.authorGiandhari, Jennifer
dc.contributor.authorPillay, Surechnee
dc.contributor.authorTumedi, Kefentse Arnold
dc.contributor.authorNyepetsi, Gape
dc.contributor.authorKebabonye, Malebogo
dc.contributor.authorMatsheka, Maitshwarelo
dc.contributor.authorMine, Madisa
dc.contributor.authorTokajian, Sima
dc.contributor.authorHassan, Hamad
dc.contributor.authorSalloum, Tamara
dc.contributor.authorMerhi, Georgi
dc.contributor.authorKoweyes, Jad
dc.contributor.authorGeoghegan, Jemma L.
dc.contributor.authorde Ligt, Joep
dc.contributor.authorRen, Xiaoyun
dc.contributor.authorStorey, Matthew
dc.contributor.authorFreed, Nikki E.
dc.contributor.authorPattabiraman, Chitra
dc.contributor.authorPrasad, Pramada
dc.contributor.authorDesai, Anita S.
dc.contributor.authorVasanthapuram, Ravi
dc.contributor.authorSchulz, Thomas F.
dc.contributor.authorSteinbrück, Lars
dc.contributor.authorStadler, Tanja
dc.contributor.authorSwiss Viollier Sequencing Consortium
dc.contributor.authorParisi, Antonio
dc.contributor.authorBianco, Angelica
dc.contributor.authorde Viedma, Darío García
dc.contributor.authorBuenestado-Serrano, Sergio
dc.contributor.authorBorges, Vítor
dc.contributor.authorIsidro, Joana
dc.contributor.authorDuarte, Sílvia
dc.contributor.authorGomes, João Paulo
dc.contributor.authorZuckermann, Neta S.
dc.contributor.authorMandelboim, Michal
dc.contributor.authorMor, Orna
dc.contributor.authorSeemann, Torsten
dc.contributor.authorArnott, Alicia
dc.contributor.authorDraper, Jenny
dc.contributor.authorGall, Mailie
dc.contributor.authorRawlinson, William
dc.contributor.authorDeveson, Ira
dc.contributor.authorSchlebusch, Sanmarié
dc.contributor.authorMcMahon, Jamie
dc.contributor.authorLeong, Lex
dc.contributor.authorLim, Chuan Kok
dc.contributor.authorChironna, Maria
dc.contributor.authorLoconsole, Daniela
dc.contributor.authorBal, Antonin
dc.contributor.authorJosset, Laurence
dc.contributor.authorHolmes, Edward
dc.contributor.authorSt. George, Kirsten
dc.contributor.authorLasek-Nesselquist, Erica
dc.contributor.authorSikkema, Reina S.
dc.contributor.authorMunnink, Bas Oude
dc.contributor.authorKoopmans, Marion
dc.contributor.authorBrytting, Mia
dc.contributor.authorRani, V. Sudha
dc.contributor.authorPavani, S.
dc.contributor.authorSmura, Teemu
dc.contributor.authorHeim, Albert
dc.contributor.authorKurkela, Satu
dc.contributor.authorUmair, Massab
dc.contributor.authorSalman, Muhammad
dc.contributor.authorBartolini, Barbara
dc.contributor.authorRueca, Martina
dc.contributor.authorDrosten, Christian
dc.contributor.authorWolff, Thorsten
dc.contributor.authorSilander, Olin
dc.contributor.authorEggink, Dirk
dc.contributor.authorReusken, Chantal
dc.contributor.authorVennema, Harry
dc.contributor.authorPark, Aekyung
dc.contributor.authorCarrington, Christine
dc.contributor.authorSahadeo, Nikita
dc.contributor.authorCarr, Michael
dc.contributor.authorGonzalez, Gabo
dc.contributor.authorSEARCH Alliance San Diego
dc.contributor.authorNational Virus Reference Laboratory
dc.contributor.authorSeqCOVID-Spain
dc.contributor.authorDanish Covid-19 Genome Consortium (DCGC)
dc.contributor.authorCommunicable Diseases Genomic Network (CDGN)
dc.contributor.authorDutch National SARS-CoV-2 surveillance program
dc.contributor.authorDivision of emerging infectious diseases (KDCA)
dc.contributor.authorde Oliveira, Tulio
dc.contributor.authorFaria, Nuno
dc.contributor.authorRambaut, Andrew
dc.contributor.authorKraemer, Moritz U. G.
dc.date.accessioned2024-07-17T15:32:21Z
dc.date.available2024-07-17T15:32:21Z
dc.date.issued2021-09-17none
dc.identifier.other10.12688/wellcomeopenres.16661.2
dc.identifier.urihttp://edoc.rki.de/176904/11798
dc.description.abstractLate in 2020, two genetically-distinct clusters of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) with mutations of biological concern were reported, one in the United Kingdom and one in South Africa. Using a combination of data from routine surveillance, genomic sequencing and international travel we track the international dispersal of lineages B.1.1.7 and B.1.351 (variant 501Y- V2). We account for potential biases in genomic surveillance efforts by including passenger volumes from location of where the lineage was first reported, London and South Africa respectively. Using the software tool grinch (global report investigating novel coronavirus haplotypes), we track the international spread of lineages of concern with automated daily reports, Further, we have built a custom tracking website (cov-lineages.org/global_report.html) which hosts this daily report and will continue to include novel SARS-CoV-2 lineages of concern as they are detected.eng
dc.language.isoengnone
dc.publisherRobert Koch-Institut
dc.rights(CC BY 3.0 DE) Namensnennung 3.0 Deutschlandger
dc.rights.urihttp://creativecommons.org/licenses/by/3.0/de/
dc.subjectgenomic surveillanceeng
dc.subjectair traveleng
dc.subjectSARS-CoV-2eng
dc.subjectgenomicseng
dc.subjectgenome sequencingeng
dc.subjectviruseng
dc.subjectsurveillanceeng
dc.subjectpandemiceng
dc.subjectB.1.1.7eng
dc.subjectB.1.351eng
dc.subjectN501Yeng
dc.subjectcoronaviruseng
dc.subjectsequencingeng
dc.subjectgenomic epidemiologyeng
dc.subject.ddc610 Medizin und Gesundheitnone
dc.titleTracking the international spread of SARS-CoV-2 lineages B.1.1.7 and B.1.351/501Y-V2 with grinch (updated)none
dc.typearticle
dc.identifier.urnurn:nbn:de:0257-176904/11798-9
dc.type.versionupdatedVersionnone
local.edoc.container-titleWellcome Open Researchnone
local.edoc.container-issn2398-502Xnone
local.edoc.pages19none
local.edoc.type-nameZeitschriftenartikel
local.edoc.container-typeperiodical
local.edoc.container-type-nameZeitschrift
local.edoc.container-urlhttps://wellcomeopenresearch.org/none
local.edoc.container-publisher-nameF1000 Research Limitednone
local.edoc.container-reportyear2021none
dc.description.versionPeer Reviewednone

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