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2022-06-09Zeitschriftenartikel
A Joint Regional Analysis of Resistance Combinations in Escherichia coli in Humans and Different Food-Producing Animal Populations in Germany Between 2014 and 2017
dc.contributor.authorSuwono, Beneditta
dc.contributor.authorEckmanns, Tim
dc.contributor.authorKaspar, Heike
dc.contributor.authorTenhagen, Bernd-Alois
dc.date.accessioned2024-09-02T12:45:20Z
dc.date.available2024-09-02T12:45:20Z
dc.date.issued2022-06-09none
dc.identifier.other10.3389/fpubh.2022.823613
dc.identifier.urihttp://edoc.rki.de/176904/12061
dc.description.abstractA joint comparative regional analysis of different resistance combinations across human and veterinary medicine has not been previously conducted in Germany. This study analyses 16 resistance combinations from four antibiotics in E. coli from different human and food-producing animal populations in three German regions: East, North West and South West. The E. coli data were collected from the three national surveillance and monitoring systems for antimicrobial resistance (AMR) bacteria in humans (ARS), food-safety (Zoonosis Monitoring) and animal pathogens (GERM-Vet) from January 2014 to December 2017. Analyses were performed using cluster analysis (hierarchical clustering, average linkage) in R. We included data from 537,215 E. coli isolates from human clinical isolates, from clinical as well as non-clinical isolates from food-producing animals and from food. The majority of the data originated from the North West region. There were two main clusters built on 54 different human and animal populations. We observed close similarities of resistance combinations in human isolates from the different regions within the same human populations from outpatient cares, general wards and ICUs. These resistance combinations clustered separately from non-clinical isolates from broilers, turkeys, cattle and pigs; except for some of clinical isolates from these populations which clustered closely to isolates from human populations. Frequently, the resistance combinations in E. coli isolates from farms clustered closely to the resistance combinations in isolates from slaughterhouses from broilers and turkeys over all regions. However, the resistance combinations in E. coli isolates from retail meat populations tended to cluster separately within their respective populations in between all regions.eng
dc.language.isoengnone
dc.publisherRobert Koch-Institut
dc.rights(CC BY 3.0 DE) Namensnennung 3.0 Deutschlandger
dc.rights.urihttp://creativecommons.org/licenses/by/3.0/de/
dc.subjectantimicrobial resistanceeng
dc.subjectescherichia colieng
dc.subjectregional analyseseng
dc.subjectsurveillance and monitoring systemseng
dc.subjectresistance combinationseng
dc.subject.ddc610 Medizin und Gesundheitnone
dc.titleA Joint Regional Analysis of Resistance Combinations in Escherichia coli in Humans and Different Food-Producing Animal Populations in Germany Between 2014 and 2017none
dc.typearticle
dc.identifier.urnurn:nbn:de:0257-176904/12061-6
dc.type.versionpublishedVersionnone
local.edoc.container-titleFrontiers in Public Healthnone
local.edoc.container-issn2296-2565none
local.edoc.pages7none
local.edoc.type-nameZeitschriftenartikel
local.edoc.container-typeperiodical
local.edoc.container-type-nameZeitschrift
local.edoc.container-urlhttps://www.frontiersin.org/journals/public-healthnone
local.edoc.container-publisher-nameFrontiers Meadia S.A.none
local.edoc.container-volume10none
local.edoc.container-reportyear2022none
dc.description.versionPeer Reviewednone

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