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Browsing Artikel in Fachzeitschriften by Author "Zickmann, Franziska"
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2015-02-26ZeitschriftenartikelIPred - integrating ab initio and evidence based gene predictions to improve prediction accuracy Zickmann, Franziska; Renard, Bernhard Y.Background: Gene prediction is a challenging but crucial part in most genome analysis pipelines. Various methods have evolved that predict genes ab initio on reference sequences or evidence based with the help of ...
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2015-06-15ZeitschriftenartikelMSProGene: integrative proteogenomics beyond six-frames and single nucleotide polymorphisms Zickmann, Franziska; Renard, Bernhard Y.Ongoing advances in high-throughput technologies have facilitated accurate proteomic measurements and provide a wealth of information on genomic and transcript level. In proteogenomics, this multi-omics data is combined ...
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2012-04-06ZeitschriftenartikelOvercoming Species Boundaries in Peptide Identification with Bayesian Information Criterion-driven Error-tolerant Peptide Search (BICEPS) Renard, Bernhard Y.; Xu, Buote; Kirchner, Marc; Zickmann, Franziska; Winter, Dominic; Korten, Simone; Brattig, Norbert W.; Tzur, Amit; Hamprecht, Fred A.; Steen, HannoCurrently, the reliable identification of peptides and proteins is only feasible when thoroughly annotated sequence databases are available. Although sequencing capacities continue to grow, many organisms remain without ...
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2012-04-06ZeitschriftenartikelOvercoming species boundaries in peptide identification with BICEPS Renard, Bernhard Y.; Xu, Buote; Kirchner, Marc; Zickmann, Franziska; Winter, Dominic; Korten, Simone; Brattig, Norbert W.; Tzur, Amit; Hamprecht, Fred A.; Steen, HannoCurrently, the reliable identification of peptides and proteins is only feasible when thoroughly annotated sequence databases are available. While sequencing capacities continue to grow, many organisms remain without ...