Browsing Artikel in Fachzeitschriften by Author "Andrusch, Andreas"
Now showing items 1-4 of 4
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2018-09-08ZeitschriftenartikelPAIPline: pathogen identification in metagenomic and clinical next generation sequencing samples Andrusch, Andreas; Dabrowski, Piotr Wojtek; Klenner, Jeanette; Tausch, Simon H.; Kohl, Claudia; Osman, Abdalla A.; Renard, Bernhard Y.; Nitsche, AndreasMotivation: Next generation sequencing (NGS) has provided researchers with a powerful tool to characterize metagenomic and clinical samples in research and diagnostic settings. NGS allows an open view into samples useful ...
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2022-08-30ZeitschriftenartikelPathoLive—Real-Time Pathogen Identification from Metagenomic Illumina Datasets Tausch, Simon H.; Loka, Tobias P.; Schulze, Jakob M.; Andrusch, Andreas; Klenner, Jeanette; Dabrowski, Piotr Wojciech; Lindner, Martin S.; Nitsche, Andreas; Renard, Bernhard Y.Over the past years, NGS has become a crucial workhorse for open-view pathogen diagnostics. Yet, long turnaround times result from using massively parallel high-throughput technologies as the analysis can only be performed ...
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2019-07-26ZeitschriftenartikelProficiency Testing of Virus Diagnostics Based on Bioinformatics Analysis of Simulated In Silico High-Throughput Sequencing Data Sets Brinkmann, Annika; Andrusch, Andreas; Belka, Ariane; Wylezich, Claudia; Höper, Dirk; Pohlmann, Anne; Nordahl Petersen, Thomas; Lucas, Pierrick; Blanchard, Yannick; Papa, Anna; Melidou, Angeliki; Oude Munnink, Bas B.; Matthijnssens, Jelle; Deboutte, Ward; Ellis, Richard J.; Hansmann, Florian; Baumgärtner, Wolfgang; van der Vries, Erhard; Osterhaus, Albert; Camma, Cesare; Mangone, Iolanda; Lorusso, Alessio; Marcacci, Maurilia; Nunes, Alexandra; Pinto, Miguel; Borges, Vítor; Kroneman, Annelies; Schmitz, Dennis; Corman, Victor Max; Drosten, Christian; Jones, Terry C.; Hendriksen, Rene S.; Aarestrup, Frank M.; Koopmans, Marion; Beer, Martin; Nitsche, AndreasQuality management and independent assessment of high-throughput sequencing-based virus diagnostics have not yet been established as a mandatory approach for ensuring comparable results. The sensitivity and specificity of ...
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2018-10-06ZeitschriftenartikelWhole Genome Characterization of Orthopoxvirus (OPV) Abatino, a Zoonotic Virus Representing a Putative Novel Clade of Old World Orthopoxviruses Gruber, Cesare E. M.; Giombini, Emanuela; Selleri, Marina; Tausch, Simon H.; Andrusch, Andreas; Tyshaieva, Alona; Cardeti, Giusy; Lorenzetti, Raniero; De Marco, Lorenzo; Carletti, Fabrizio; Nitsche, Andreas; Capobianchi, Maria R.; Ippolito, Giuseppe; Autorino, Gian Luca; Castilletti, ConcettaOrthopoxviruses (OPVs) are diffused over the complete Eurasian continent, but previously described strains are mostly from northern Europe, and few infections have been reported from Italy. Here we present the extended ...